动植物疫病检测篇
1.宠物病原体
1.1猫冠状病毒荧光RT-RAA检测方法的建立
1.2基于等温扩增技术的布鲁氏杆菌检测方法及试剂盒研究
2.禽类疫病
2.1Establishment of reverse transcription re combi-nase-aided amplification-lateral-flow dipstick andreal-time fluores cence-based reverse transcriptionrecombinase-aided amplification methods for detec-tion of the Newcastle disease virus in chickens
2.2RAA-LFD assay-a specific and sensitive method forvisual detection of avian infec tious laryngotracheitisvirus
2.3Reverse transcription recombinase-aided amplifica-tion assay combined with a lateral flow dipstick fordetection of avian infectious bronchitis virus
2.4Research Note: Rapid detection of avian infectiouslaryn gotracheitis virus with real-time fluores-cence-based recombinase-aided amplification
2.5Reverse-transcription recombinase-aided amplification assay for H7 subtype avian influenza virus
2.6重组酶介导的等温扩增法检测H7N9禽流感病毒
2.7禽流感RT-RAA侧向流试纸条可视化检测方法的建立
2.8多杀性巴氏杆菌荧光RAA快速检测方法的建立
2.9禽流感病毒H5N1的重组酶介导检测方法学研究
3.动物疫病
3.1Clinical Validation of Two Recombinase-Based lsothermal Amplification Assays (RPA/RAA)for the RapidDetection of African Swine Fever Virus
3.2非洲猪瘟病毒实时荧光RAA检测方法的建立
3.3猪附红细胞体重组酶介导等温扩增技术RAA荧光检测方法的建立
3.4牛病毒性腹泻病毒1型RT-RAA快速诊断方法的建立
3.5猪圆环病毒4型实时荧光RAA检测方法的建立
3.6重组酶介导的油菜茎基溃疡病菌荧光核酸扩增检测体系的建立
4.植物疫病
4.1CRISPR-Cas Detection Coupled with lsothermalAmplification of Bursaphelenchus xylophilus
猫冠状病毒荧光RT-RAA检测方法的建立
摘要根据猫冠状病毒(FCoV)7b基因序列,设计引物及探针,建立了FCoV荧光RT一RAA检测方法。该方法能够在39℃恒温条件下20min内对病原进行快速检测,与猫疱疹病毒、猫杯状病毒、猫细小病毒均无交叉反应;对病毒核酸的最低检测限为1.97×101fg/uL。用套式PCR与建立的荧光RT一RAA对30份疑似FCoV感染临床样品进行检测,两种方法符合率为93.33%。结果表明,建立的FCoV荧光RT一RAA方法适用于FCoV快速检测。
关键词:猫冠状病毒;荧光RT—RAA;快速检测。
基于等温扩增技术的布鲁氏杆菌检测方法及试剂盒研究
摘 要:介绍了布鲁氏菌病的危害及检测技术,研究了布鲁氏杆菌等温扩增技术,说明了其可用于检测布鲁氏杆菌 DNA含量较低的样品,研制的试剂盒可在30℃~42℃下进行等温扩增检测,5~20min完成 检测。指出了试剂盒具有快速、灵敏、准确、重复性好的优点,适合基层和现场检测,具有良好的应用前景。
关键词:等温扩增;布鲁氏杆菌;检测方法;试剂盒。
Establishment of reverse transcription re-combinase-aided amplification-lateral-flowdipstick and real-time fluorescence-basedreverse transcription recombinase-aidedamplification methods for detection oftheNewcastle disease virus in chickens
ABSTRACT Newcastle disease is an acute and highly contagious disease of poultry caused by Newcastle disease virus infection,which does great harm to the poultry industry all over the world.To diagnose the diseasesimply and quickly,2 detection methods were established based on reverse transcription recombinaseaidedamplification(RT-RAA) technology.One is reverse transcription recombinase-aided amplification lateral flowdipstick(RT-RAA-LFD) that is to combine RT-RAA with lateral flow dipstick;the other is real-time fluores-cence-based reverse transcription recombinase-aided amplification(RF-RT-RAA) that is the combination ofRT-RAA and exo probe.In this study,the reaction conditions such as reaction temper ature and reaction timeof the 2 methods were opti mized,and their specificity and sensitivity were tested.The results showed that theRT-RAA-LFD method could be used to complete reaction within 23 min,and its lowest detectable limit was 102copies/mL,10 times higher than that of the conventional PCR method (103copies/mL);the RF-RT-RAA methodcould be used to complete reaction within 26 min, and its lowest detect able limit was 10 copies/mL,100 timeshigher than that of conventional PCR method (103 copies/mL),and it was as sensitive as real-time fluores-cence-based quantitative PCR (10 copies/mL).The 2 methods had no cross reac tion to the nucleic acid ofother avian pathogens and showed good specificity.A total of 86 clinical samples suspected of the Newcastledisease virus were tested by conventional PCR, real-time fluorescence-based quan titative PCR,RT-RAA-LFD,and RF-RT-RAA.Based on the commonly used conventional PCR method,the other 3 detection methods had acoincidence rate of higher than 93%.In summary,RT-RAA-LFD and RF RT-RAA had high specificity,sensitivity.and efficiency,which were suitable for clinical and laboratory diagnosis,respectively,and provided technicalsupport for the prevention and control of Newcastle disease.
Key words:Newcastle disease virus,reverse transcription recombinase-aided amplification-lateral flowdipstick,real-time fluorescence-based-reverse transcription recombinase-aided amplification,detection.
RAA-LFD assay-a specific and sensitivemethod for visual detection of avian infec-tious laryngotracheitis virus
ABSTRACT The purpose of this study was to explore a specific,simple and sensitive method for diagnosis ofavian infectious laryngotracheitis virus (LTV).The recombinase-aided amplification (RAA) and lateral flowdipstick(LFD) were combined for labelling the optimized RAA probe with 6-carboxyfluorescein (FAM) and the5' end of downstream primer with biotin,respectively.By optimizing the reaction time,temperature andprimer concentration of RAA,a RAA-LFD assay which could be used for detection of infectious laryngotra-cheitis (ILT) was established.After specificity and sensitivity test,the target gene fragments could be ampli-fied by RAA-LFD assay in 20 min under isothermal conditions (37 口),and the amplification products could bevisually observed and determined by LFD within 3 min.There was no cross reaction with nucleic aids of otheravian pathogens,the lowest detectable limit (LDL) of RAA-LFD was 102 copies/uL,and the sensitivity of thismethod was 100 times higher than that of conventional CR with LDL of 104 copies/uL.The results showedthat RAA-LFD assay was highly sensitive,easy to use,and more suitable for clinical detection.
Key words:avian infectious laryngotracheitis virus;recombinase-aided amplification;lateral flow dipstick.